War having broken out between England and France, Jones was detained in Europe, instead of sailing home in the Ranger, through the request of the French Minister of Marine, de Sartine, who wished an important command to be assigned to the famous conqueror of the Drake. The difficulties, however, in the way of doing so were great. The commissioners had few resources, and one of them, Arthur Lee, was hostile to Jones. Moreover the French government naturally thought first of its own officers, of whom there were too many for the available vessels. Several privateering expeditions were suggested to Jones, which he quite justly rejected. Several opportunities had also been given him for small commands, which he had likewise rejected. His manner in doing so could not exactly be called diplomatic. He wrote M. Chaumont, that patriotic and benevolent gentleman whom Jones alternately flattered and reviled, a rather typical letter: "I wish to have no connection with any ship that does not sail fast; for I intend to go in harm's way. You know, I believe, that this is not every one's intention. Therefore buy a frigate that sails fast, and that is sufficiently large to carry twenty-six or twenty-eight guns on one deck. I would rather be shot ashore than sent to sea in such things as the armed prizes I have described."

The innumerable delays which consequently intervened between his arrival at Brest, in May, 1778, and his departure on his next cruise a year later, in June, 1779, put the active Scotchman in a state of constant irritation. He continued his dunning correspondence with the greatest energy, alternately cajoling, proposing, complaining, begging to be sent on some important enterprise. He wrote innumerable letters to de Sartine, Franklin, the Duc de Rochefoucauld, de Chaumont, and many others, and finally to the king himself, with whom he afterwards had an interview. The statement of his wrongs in his letter to the king, reiterated in letters to many others, involves an account of the many promises de Sartine had made and broken, and of Jones's various important proposals for the public good, which had been slighted.

"Thus, sire," he writes, "have I been chained down to shameful inactivity for nearly five months. I have lost the best season of the year and such opportunities of serving my country and acquiring honor as I can hardly expect again in this war; and to my infinite mortification, having no command, I am considered everywhere an officer cast off and in disgrace for secret reasons."

Jones's pertinacity and perseverance in working for a command are quite on a par with his indomitable resolution in battle, and he was finally rewarded, probably through the king's direct order, by being put in command of a small squadron, with which he made the cruise resulting in the capture of the Serapis and in his own fame.

Jones was highly delighted with the appointment, but his troubles continued in full measure, and to all his troubles Jones gave wide and frequent publicity. All the ships of his squadron, with the exception of the Alliance, were French, largely officered and manned by Frenchmen. The expense of fitting out the expedition was the king's. The flag and the commissions of the officers were American. The object of the French government was to secure the services of the marauding Jones against the coasts and shipping of England. This could better be done under the United States flag than under that of France; for the rules of civilized warfare had up to that time prevented the British from ravaging the coasts of France as they had those of rebel America, and France was therefore not morally justified in harassing the English shipping and coasts directly; as, on the principle of retaliation, it was fair for America to do.

This peculiar character of the expedition brought with it many drawbacks and difficulties for the unfortunate Jones. He had a motley array of ships,—those which were left over after the French officers had been satisfied. The flagship, the Bonhomme Richard, was a worn-out old East Indiaman, which Jones refitted and armed with six eighteen-pounders, twenty-eight twelve-pounders, and eight nine-pounders—a battery of forty-two guns. The crew of 375, of many nationalities, contained, when the fleet sailed, only about fifty Americans; but fortunately, a few days later, Jones was compelled to put back to port, where he was unexpectedly able, owing to a recent exchange of prisoners, to get rid of some of his aliens, and to secure 114 American officers and sailors, who proved to be the backbone of the Richard's crew. The Alliance, the only American ship, was a good frigate rating as a large thirty-two or medium thirty-six, but captained by a mad Frenchman in the American service, Landais, who refused to obey Jones, and in the important fight with the Serapis turned his guns against his commander. The Pallas, thirty-two guns, the Vengeance, twelve guns, and the little Cerf were all officered and manned by Frenchmen.

The greatest hindrance, however, to the efficiency of the squadron was the famous concordat, or agreement between the captains, which Jones was compelled to sign just before sailing. The terms, indeed, which related largely to the distribution of prize money, left Jones in the position of commander in chief, but the fact that there was any agreement whatever between Jones and his subordinates weakened his authority. Of this, as of so many other injustices, Jones complained most bitterly all through his subsequent life. He signed it, however, because, he said in his journal, he feared that he would otherwise be removed from his position as commodore. In a letter to Hewes he gave Franklin's command as the cause.

The squadron, accompanied at the outset by two French privateers, sailed finally from L'Orient, after one futile attempt, August 14, 1779, and made during the first forty days of the fifty days' cruise a number of unimportant prizes. On the 18th of August, the privateer Monsieur, which was not bound by the concordat, took a prize, which the captain of the Monsieur rifled, and then ordered into port. Jones, however, opposed the captain's order, and sent the prize to L'Orient, whereupon the Monsieur parted company with the squadron. According to Fanning, one of Jones's midshipmen, who has left a spirited account of the cruise, Jones attempted to prevent the departure of the privateer by force, and when she escaped was so angry that he "struck several of his officers with his speaking trumpet over their heads," and confined one of them below, but immediately afterwards invited him to dinner. "Thus it was with Jones," says Fanning, "passionate to the highest degree one minute, and the next ready to make a reconciliation."

The defection of the Monsieur was, however, only the beginning of Jones's troubles with the insubordinate officers. While attempting to capture a brigantine, Jones, through the desertion of some of his English sailors, lost two of his small boats, for which he was bitterly and unjustly reproached by the crazy, incompetent, and greedy Landais, captain of the Alliance, who said that hereafter he would chase in the manner he saw fit. Shortly afterwards, the Cerf abruptly left the fleet, and the other privateer also went off on its own account. Jones was left with only the Bonhomme Richard, the Pallas, the Vengeance, and the Alliance; and it would have been better, as the result showed, if the last-mentioned vessel and its extraordinary captain had also decamped at this time for good. Landais paid no attention to Jones's signals, but left the squadron for days, unfortunately returning. Against Jones's orders he sent two prizes into Bergen, Norway, where they were given by the Danish government to the English, and were for many years after the war a source of trouble between Denmark and the United States.

Jones was also compelled to treat with the other French captains, and several times modified his course in compliance with their demands. He had formed a daring design to lay Leith, on the coast of Scotland, and perhaps Edinburgh, under contribution, but first he had to argue the matter with his captains. Fanning says: "Jones displayed so artfully his arguments in favor of his plan that it was agreed pretty unanimously to put it in immediate execution." Jones's art was manifested in this instance, according to his account, by showing the captains "a large heap of gold at the end of the prospect." During this enforced conference, however, the wind shifted, and the undertaking had to be given up. Fanning quaintly remarks: "All his [Jones's] vast projects of wealth and aggrandizement became at once a shadow that passeth away, never more to appear again!"

Jones, however, said that he would have succeeded, even at this late hour, if his plan had been followed, and showed a touch of the weak side of his character when he added: "Nothing prevented me from pursuing my design but the reproach that would have been cast upon my character, as a man of prudence, had the enterprise miscarried. It would have been said: 'Was he not forewarned by Captain Cottineau and others?'"

With his old ship, his motley squadron, and his insubordinate officers, Jones then cruised along the Yorkshire coast, destroyed or captured a number of vessels, and was preparing to end his voyage at the Texel, Holland, when chance threw in his way the opportunity which he so greatly embraced.

On the 23d of September the squadron was chasing a ship off Flamborough Head, when the Baltic fleet of merchantmen, for which Jones had been looking, hove in sight. The commodore hoisted the signal for a general chase. Landais, however, ignored the signal and went off by himself. The merchant ships, when they saw Jones's squadron bearing down upon them, made for the shore and escaped, protected by two ships of war, frigates, which stood out and made preparations to fight, in order to save their convoy.

These British ships of war were the Serapis, a new frigate of forty-four guns, and the Countess of Scarborough, twenty guns. The Alliance, at that time, which was late in the afternoon, was not in sight, and the little Vengeance, which had been sent to look for Landais, was also not available. There were, therefore, two ships on each side, and Jones ordered Captain Cottineau, of the Pallas, to look after the Countess of Scarborough, while he himself took care of the Serapis. Jones never lost his head in action, and yet he decided, with that "cool, determined bravery," of which Benjamin Franklin spoke, and with "that presence of mind which never deserted him" in action, recorded by Fanning, to engage a ship known by him to be the superior of the Bonhomme Richard in almost every respect. It has been said of Jones by one who fought with him that only in battle was he absolutely at ease: only at times of comparative inaction, when he could not exert himself fully, was he restless and irritable. On this occasion he joyfully engaged a ship which threw a weight of metal superior to his by three to two, that sailed much faster, and was consequently at an advantage in manoeuvring for position, and that had a crew equal to that of Jones in numbers, and far more disciplined and homogeneous. A battle resulted which for desperate fighting has never been excelled, and perhaps never equaled on the sea.